BLASTX 2.2.26+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: minirefseq_prot
           20 sequences; 6,406 total letters



Query= random_s00

Length=128


***** No hits found *****





Effective search space used: 0


Query= hg19_dna range=chr1:1207057-1207541 5'pad=0 3'pad=0 strand=+
repeatMasking=none

Length=485
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  gi|332258565|ref|XP_003278367.1| PREDICTED: UPF0764 protein C16...   121    3e-38
  gi|374093214|ref|NP_001243358.1| PDZ and LIM domain protein 5 i...   114    2e-35
  gi|297669362|ref|XP_002812869.1| PREDICTED: histone demethylase...  98.2    2e-29
  gi|57113895|ref|NP_001009002.1| histone demethylase UTY [Pan tr...   104    5e-29
  gi|33188429|ref|NP_872601.1| histone demethylase UTY isoform 1 ...   104    6e-29
  gi|42560248|ref|NP_002692.2| POU domain, class 5, transcription...  17.3    5.0  
  gi|149754664|ref|XP_001490158.1| PREDICTED: POU domain, class 5...  17.3    5.0  
  gi|354487500|ref|XP_003505911.1| PREDICTED: POU domain, class 5...  16.9    6.6  


> gi|332258565|ref|XP_003278367.1| PREDICTED: UPF0764 protein C16orf89-like 
[Nomascus leucogenys]
Length=132

 Score =  121 bits (304),  Expect = 3e-38
 Identities = 69/95 (73%), Positives = 74/95 (78%), Gaps = 0/95 (0%)
 Frame = -3

Query  300  LRRSFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGF  121
            LRRSFALVAQ  VQW +LG PQPPPPGFK FSCLS  SSW+YRH+PP L NF+FLVE GF
Sbjct  25   LRRSFALVAQTRVQWYNLGSPQPPPPGFKRFSCLSLLSSWEYRHVPPHLANFLFLVEMGF  84

Query  120  YHVGQAGLEPPISGNLPAWASQSVGITGVSHHAQP  16
             HVGQAGLE   SG+ P   SQS GI GVSH AQP
Sbjct  85   LHVGQAGLELVTSGDPPTLTSQSAGIIGVSHCAQP  119


 Score = 51.6 bits (122),  Expect = 3e-12
 Identities = 34/72 (47%), Positives = 41/72 (57%), Gaps = 5/72 (7%)
 Frame = -3

Query  459  VGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSFAL  280
            V   RVQ ++L S QPP P FK FS LSL SSW+ R  PPH AN     F F +   F  
Sbjct  32   VAQTRVQWYNLGSPQPPPPGFKRFSCLSLLSSWEYRHVPPHLAN-----FLFLVEMGFLH  86

Query  279  VAQAGVQWLDLG  244
            V QAG++ +  G
Sbjct  87   VGQAGLELVTSG  98


> gi|374093214|ref|NP_001243358.1| PDZ and LIM domain protein 5 
isoform i [Homo sapiens]
Length=136

 Score =  114 bits (286),  Expect = 2e-35
 Identities = 63/88 (72%), Positives = 69/88 (78%), Gaps = 0/88 (0%)
 Frame = -3

Query  279  VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG  100
            ++ AGVQW +LG PQPP P FK FSCLS PSSWDYRH+PP L NFVFLVET F +VGQAG
Sbjct  30   ISSAGVQWRNLGSPQPPSPEFKRFSCLSLPSSWDYRHVPPRLANFVFLVETKFPYVGQAG  89

Query  99   LEPPISGNLPAWASQSVGITGVSHHAQP  16
            LE P SG+LP  ASQS  ITGVSH A P
Sbjct  90   LELPTSGDLPTSASQSAKITGVSHRAWP  117


 Score = 52.4 bits (124),  Expect = 2e-12
 Identities = 33/69 (48%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
 Frame = -3

Query  465  VSVGPARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPANffffffffFLRRSF  286
            +++  A VQ  +L S QPP+PEFK FS LSL SSWD R  PP  AN     F F +   F
Sbjct  28   LTISSAGVQWRNLGSPQPPSPEFKRFSCLSLPSSWDYRHVPPRLAN-----FVFLVETKF  82

Query  285  ALVAQAGVQ  259
              V QAG++
Sbjct  83   PYVGQAGLE  91


> gi|297669362|ref|XP_002812869.1| PREDICTED: histone demethylase 
UTY-like [Pongo abelii]
Length=110

 Score = 98.2 bits (243),  Expect = 2e-29
 Identities = 57/91 (63%), Positives = 64/91 (70%), Gaps = 0/91 (0%)
 Frame = -3

Query  279  VAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHVGQAG  100
            V  AGVQW +L   QPPP GFK FS LS  SSWD R  PP L+ FVFL+ETGF+HVGQAG
Sbjct  19   VPHAGVQWHNLSSLQPPPSGFKPFSYLSLLSSWDQRRPPPRLVIFVFLIETGFHHVGQAG  78

Query  99   LEPPISGNLPAWASQSVGITGVSHHAQPLCE  7
            L+    G+ PA ASQS GI GVSH A P C+
Sbjct  79   LKLLTLGDPPASASQSAGIRGVSHCAWPECQ  109


> gi|57113895|ref|NP_001009002.1| histone demethylase UTY [Pan 
troglodytes]
Length=1079

 Score =  104 bits (260),  Expect = 5e-29
 Identities = 59/91 (65%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
 Frame = -3

Query  291   SFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHV  112
             SF    +AG+QW DL   QPPPPGFK FS LS P+SW+YRH+P C  NF   VETGF+HV
Sbjct  989   SFQESLRAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHV  1048

Query  111   GQAGLEPPISGNLPAWASQSVGITGVSHHAQ  19
             GQA LE   SG L A ASQS GITGVSHHA+
Sbjct  1049  GQAHLELLTSGGLLASASQSAGITGVSHHAR  1079


 Score = 47.8 bits (112),  Expect = 4e-10
 Identities = 25/41 (61%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
 Frame = -3

Query  450   ARVQ*HDLSSLQPPAPEFK*FSHLSLQSSWDCRCPPPHPAN  328
             A +Q  DLSSLQPP P FK FSHLSL +SW+ R  P  P N
Sbjct  996   AGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTN  1036


 Score = 20.0 bits (40),  Expect = 0.72
 Identities = 7/11 (64%), Positives = 7/11 (64%), Gaps = 0/11 (0%)
 Frame = -1

Query  365   AGIAGAHHHTR  333
             AGI G  HH R
Sbjct  1069  AGITGVSHHAR  1079


 Score = 19.6 bits (39),  Expect = 0.96
 Identities = 5/7 (71%), Positives = 6/7 (86%), Gaps = 0/7 (0%)
 Frame = -3

Query  354  RCPPPHP  334
            +CPPP P
Sbjct  864  KCPPPRP  870


 Score = 18.5 bits (36),  Expect = 2.2
 Identities = 5/7 (71%), Positives = 6/7 (86%), Gaps = 0/7 (0%)
 Frame = -2

Query  40   RCEPPRP  20
            +C PPRP
Sbjct  864  KCPPPRP  870


 Score = 16.9 bits (32),  Expect = 7.0
 Identities = 6/12 (50%), Positives = 8/12 (67%), Gaps = 0/12 (0%)
 Frame = +3

Query  114  HGKTPSLLKIQN  149
            HG +P+LL   N
Sbjct  713  HGDSPNLLIADN  724


> gi|33188429|ref|NP_872601.1| histone demethylase UTY isoform 
1 [Homo sapiens]
Length=1079

 Score =  104 bits (259),  Expect = 6e-29
 Identities = 59/91 (65%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
 Frame = -3

Query  291   SFALVAQAGVQWLDLGppqpppPGFK*FSCLSHPSSWDYRHMPPCLINFVFLVETGFYHV  112
             SF    +AG+QW DL   QPPPPGFK FS LS P+SW+YRH+P C  NF   VETGF+HV
Sbjct  989   SFQESLRAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHV  1048

Query  111   GQAGLEPPISGNLPAWASQSVGITGVSHHAQ  19
             GQA LE   SG L A ASQS GITGVSHHA+
Sbjct  1049  GQACLELLTSGGLLASASQSAGITGVSHHAR  1079



Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 662354


  Database: minirefseq_prot
    Posted date:  Jun 9, 2012  2:05 PM
  Number of letters in database: 6,406
  Number of sequences in database:  20



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 12
Window for multiple hits: 40
