sample	chr	startpos	endpos	nMajor	nMinor
TCGA-DX-A3LS	1	61735	121741181	1	1
TCGA-DX-A3LS	1	143285278	248930189	2	1
TCGA-DX-A3LS	2	12784	242147305	1	1
TCGA-DX-A3LS	3	18667	66768	2	1
TCGA-DX-A3LS	3	74111	196197	5	1
TCGA-DX-A3LS	3	200558	867313	1	0
TCGA-DX-A3LS	3	867355	886641	3	0
TCGA-DX-A3LS	3	886773	947081	1	0
TCGA-DX-A3LS	3	948533	1085246	4	1
TCGA-DX-A3LS	3	1085349	7217997	1	0
TCGA-DX-A3LS	3	7218258	7345713	2	1
TCGA-DX-A3LS	3	7346023	7621481	5	1
TCGA-DX-A3LS	3	7622060	8098092	1	0
TCGA-DX-A3LS	3	8099831	8658440	5	1
TCGA-DX-A3LS	3	8660003	9693913	1	1
TCGA-DX-A3LS	3	9694224	9735604	3	2
TCGA-DX-A3LS	3	9739510	10456555	1	0
TCGA-DX-A3LS	3	10456584	10552523	4	1
TCGA-DX-A3LS	3	10555162	11675397	1	0
TCGA-DX-A3LS	3	11677576	13495065	1	1
TCGA-DX-A3LS	3	13499141	14478656	1	0
TCGA-DX-A3LS	3	14479052	14577743	5	1
TCGA-DX-A3LS	3	14579301	14717103	1	0
TCGA-DX-A3LS	3	14717503	14825059	4	1
TCGA-DX-A3LS	3	14829189	16958802	1	0
TCGA-DX-A3LS	3	16959418	17162627	3	1
TCGA-DX-A3LS	3	17163855	18521977	1	0
TCGA-DX-A3LS	3	18531529	18785354	4	1
TCGA-DX-A3LS	3	18790033	19534810	1	0
TCGA-DX-A3LS	3	19535449	20378187	2	1
TCGA-DX-A3LS	3	20378235	20466361	11	3
TCGA-DX-A3LS	3	20466539	21075397	1	1
TCGA-DX-A3LS	3	21075615	86897606	1	0
TCGA-DX-A3LS	3	86898506	88668511	9	1
TCGA-DX-A3LS	3	88675124	89809187	1	0
TCGA-DX-A3LS	3	89813753	93824358	6	2
TCGA-DX-A3LS	3	93828351	198169247	1	1
TCGA-DX-A3LS	4	12281	53013575	1	1
TCGA-DX-A3LS	4	53013983	116962940	1	0
TCGA-DX-A3LS	4	116964099	117780291	1	1
TCGA-DX-A3LS	4	117780842	125334612	1	0
TCGA-DX-A3LS	4	125346842	126854408	1	1
TCGA-DX-A3LS	4	126854978	128760241	1	0
TCGA-DX-A3LS	4	128760882	130015629	1	1
TCGA-DX-A3LS	4	130022258	135564977	1	0
TCGA-DX-A3LS	4	135568552	137315599	2	1
TCGA-DX-A3LS	4	137315940	137608977	4	1
TCGA-DX-A3LS	4	137611292	145176204	1	1
TCGA-DX-A3LS	4	145178495	146767508	4	1
TCGA-DX-A3LS	4	146771121	148903682	1	1
TCGA-DX-A3LS	4	148905761	154070400	1	0
TCGA-DX-A3LS	4	154070530	160697531	1	1
TCGA-DX-A3LS	4	160697632	162217331	6	1
TCGA-DX-A3LS	4	162217534	163324253	1	1
TCGA-DX-A3LS	4	163329645	190106768	1	0
TCGA-DX-A3LS	5	15532	386657	1	0
TCGA-DX-A3LS	5	403003	2229217	6	1
TCGA-DX-A3LS	5	2229259	4516557	3	1
TCGA-DX-A3LS	5	4517396	5727988	2	1
TCGA-DX-A3LS	5	5728950	7698330	1	0
TCGA-DX-A3LS	5	7701053	8621214	2	1
TCGA-DX-A3LS	5	8621679	9877498	9	1
TCGA-DX-A3LS	5	9883040	11100760	1	1
TCGA-DX-A3LS	5	11101075	11959182	2	1
TCGA-DX-A3LS	5	11961395	12170771	6	1
TCGA-DX-A3LS	5	12181036	18258466	2	1
TCGA-DX-A3LS	5	18258594	20501070	1	1
TCGA-DX-A3LS	5	20503680	21929015	10	1
TCGA-DX-A3LS	5	21929812	22054951	4	1
TCGA-DX-A3LS	5	22055135	160250912	1	1
TCGA-DX-A3LS	5	160251934	162479808	2	1
TCGA-DX-A3LS	5	162482633	181363319	1	1
TCGA-DX-A3LS	6	149661	2447368	1	1
TCGA-DX-A3LS	6	2447465	5589009	2	1
TCGA-DX-A3LS	6	5591633	8293449	1	1
TCGA-DX-A3LS	6	8293504	9542526	2	1
TCGA-DX-A3LS	6	9542705	18162450	1	1
TCGA-DX-A3LS	6	18163591	27974632	1	0
TCGA-DX-A3LS	6	27980310	28828079	5	1
TCGA-DX-A3LS	6	28833606	33529668	1	1
TCGA-DX-A3LS	6	33535241	36428042	3	1
TCGA-DX-A3LS	6	36431788	73759230	1	1
TCGA-DX-A3LS	6	73763272	73901202	11	1
TCGA-DX-A3LS	6	73901481	114524094	1	1
TCGA-DX-A3LS	6	114525843	115443435	13	1
TCGA-DX-A3LS	6	115443568	115563323	5	1
TCGA-DX-A3LS	6	115565024	117772428	1	1
TCGA-DX-A3LS	6	117784053	117824317	9	1
TCGA-DX-A3LS	6	117824659	117898691	4	0
TCGA-DX-A3LS	6	117904551	118008500	10	1
TCGA-DX-A3LS	6	118011870	118321588	19	1
TCGA-DX-A3LS	6	118321763	118380726	8	0
TCGA-DX-A3LS	6	118381461	119018169	14	1
TCGA-DX-A3LS	6	119030828	119065019	3	0
TCGA-DX-A3LS	6	119065991	119353338	19	1
TCGA-DX-A3LS	6	119353739	119953757	5	1
TCGA-DX-A3LS	6	119956627	170741917	1	1
TCGA-DX-A3LS	7	43259	78327658	1	1
TCGA-DX-A3LS	7	78334244	78437124	10	3
TCGA-DX-A3LS	7	78437167	127500028	1	1
TCGA-DX-A3LS	7	127503180	128194863	11	1
TCGA-DX-A3LS	7	128195205	132837116	1	1
TCGA-DX-A3LS	7	132837938	133292583	17	1
TCGA-DX-A3LS	7	133299577	133667565	3	0
TCGA-DX-A3LS	7	133669212	134476995	16	1
TCGA-DX-A3LS	7	134481986	159334314	1	1
TCGA-DX-A3LS	8	81254	3170627	1	0
TCGA-DX-A3LS	8	3171569	3357685	7	1
TCGA-DX-A3LS	8	3357745	31867474	1	0
TCGA-DX-A3LS	8	31869545	32540415	3	1
TCGA-DX-A3LS	8	32541249	32598993	1	0
TCGA-DX-A3LS	8	32601400	32617104	7	1
TCGA-DX-A3LS	8	32617809	32776724	6	1
TCGA-DX-A3LS	8	32778056	36827925	1	0
TCGA-DX-A3LS	8	36828595	37120107	5	1
TCGA-DX-A3LS	8	37124069	37975985	1	1
TCGA-DX-A3LS	8	37976794	38096373	3	0
TCGA-DX-A3LS	8	38099463	38135757	4	0
TCGA-DX-A3LS	8	38138657	38816088	13	1
TCGA-DX-A3LS	8	38823558	38994917	4	1
TCGA-DX-A3LS	8	38995448	43565674	1	0
TCGA-DX-A3LS	8	43565689	98127382	1	1
TCGA-DX-A3LS	8	98127980	98195636	7	2
TCGA-DX-A3LS	8	98195962	145072769	1	1
TCGA-DX-A3LS	9	46587	4082911	1	0
TCGA-DX-A3LS	9	4083297	5047231	5	1
TCGA-DX-A3LS	9	5047247	42995504	1	0
TCGA-DX-A3LS	9	60840363	98472863	1	1
TCGA-DX-A3LS	9	98473218	98915814	1	0
TCGA-DX-A3LS	9	98915991	99568999	4	1
TCGA-DX-A3LS	9	99569765	100571295	7	1
TCGA-DX-A3LS	9	100573226	104977910	4	1
TCGA-DX-A3LS	9	104979985	105575933	3	1
TCGA-DX-A3LS	9	105586608	107900075	1	1
TCGA-DX-A3LS	9	107900222	108266607	2	1
TCGA-DX-A3LS	9	108267187	110379535	1	0
TCGA-DX-A3LS	9	110379679	112678457	2	1
TCGA-DX-A3LS	9	112679158	115392324	1	0
TCGA-DX-A3LS	9	115394241	121371585	2	1
TCGA-DX-A3LS	9	121372720	124520948	1	0
TCGA-DX-A3LS	9	124526418	124847016	3	1
TCGA-DX-A3LS	9	124847597	129208012	1	0
TCGA-DX-A3LS	9	129214229	130075039	1	1
TCGA-DX-A3LS	9	130081149	131525512	1	0
TCGA-DX-A3LS	9	131534220	134224359	2	1
TCGA-DX-A3LS	9	134230564	134739590	1	0
TCGA-DX-A3LS	9	134741697	136243135	3	1
TCGA-DX-A3LS	9	136243382	137472156	1	0
TCGA-DX-A3LS	9	137476471	137871211	4	1
TCGA-DX-A3LS	9	137872516	138200944	2	1
TCGA-DX-A3LS	10	26823	133769379	1	1
TCGA-DX-A3LS	11	198572	22164521	1	0
TCGA-DX-A3LS	11	22166119	25882359	1	1
TCGA-DX-A3LS	11	25882531	41720038	1	0
TCGA-DX-A3LS	11	41720922	135074876	1	1
TCGA-DX-A3LS	12	51460	13061660	3	1
TCGA-DX-A3LS	12	13061954	38529523	2	2
TCGA-DX-A3LS	12	38530102	49551898	1	0
TCGA-DX-A3LS	12	49553504	49674306	10	0
TCGA-DX-A3LS	12	49694237	51207512	1	0
TCGA-DX-A3LS	12	51209045	51270557	8	1
TCGA-DX-A3LS	12	51274402	57606433	1	0
TCGA-DX-A3LS	12	57612562	57627221	25	4
TCGA-DX-A3LS	12	57630198	57980542	19	3
TCGA-DX-A3LS	12	57981163	58343486	9	1
TCGA-DX-A3LS	12	58345633	58449676	1	0
TCGA-DX-A3LS	12	58450075	58462373	13	2
TCGA-DX-A3LS	12	58468308	59853160	1	0
TCGA-DX-A3LS	12	59853705	60566899	25	1
TCGA-DX-A3LS	12	60567248	60567248	5	4
TCGA-DX-A3LS	12	60568869	60582870	18	0
TCGA-DX-A3LS	12	60585138	61104609	1	1
TCGA-DX-A3LS	12	61104696	61152475	12	3
TCGA-DX-A3LS	12	61153618	61250151	1	0
TCGA-DX-A3LS	12	61255569	61577362	14	1
TCGA-DX-A3LS	12	61577405	61606005	6	6
TCGA-DX-A3LS	12	61612220	67423441	1	0
TCGA-DX-A3LS	12	67424547	67569459	18	2
TCGA-DX-A3LS	12	67576149	68682006	1	0
TCGA-DX-A3LS	12	68688816	68817107	46	3
TCGA-DX-A3LS	12	68817137	69120667	31	1
TCGA-DX-A3LS	12	69121188	69393927	1	0
TCGA-DX-A3LS	12	69400306	69883526	21	1
TCGA-DX-A3LS	12	69884103	71196344	1	0
TCGA-DX-A3LS	12	71196986	71486883	30	0
TCGA-DX-A3LS	12	71490613	71995059	5	1
TCGA-DX-A3LS	12	71995422	72341721	11	1
TCGA-DX-A3LS	12	72344889	72698150	2	0
TCGA-DX-A3LS	12	72701374	73369374	15	1
TCGA-DX-A3LS	12	73369609	73379327	8	4
TCGA-DX-A3LS	12	73384436	74427314	1	0
TCGA-DX-A3LS	12	74430033	75339052	23	0
TCGA-DX-A3LS	12	75341364	78659172	1	0
TCGA-DX-A3LS	12	78661365	79170403	22	2
TCGA-DX-A3LS	12	79173201	81743680	1	0
TCGA-DX-A3LS	12	81747358	82213986	16	1
TCGA-DX-A3LS	12	82219502	84505391	1	0
TCGA-DX-A3LS	12	84506195	85243532	17	0
TCGA-DX-A3LS	12	85245473	85982799	2	0
TCGA-DX-A3LS	12	85985085	86154419	7	1
TCGA-DX-A3LS	12	86155877	86575293	3	0
TCGA-DX-A3LS	12	86578216	86707453	16	3
TCGA-DX-A3LS	12	86710541	86981556	23	1
TCGA-DX-A3LS	12	86982760	86998770	16	8
TCGA-DX-A3LS	12	87000345	88699929	1	0
TCGA-DX-A3LS	12	88709125	88784356	7	1
TCGA-DX-A3LS	12	88784892	88816960	1	0
TCGA-DX-A3LS	12	88818389	88951454	10	2
TCGA-DX-A3LS	12	88951712	89094852	5	0
TCGA-DX-A3LS	12	89095379	89210965	34	3
TCGA-DX-A3LS	12	89212284	89551582	6	1
TCGA-DX-A3LS	12	89552407	89896230	17	1
TCGA-DX-A3LS	12	89897077	89966286	22	1
TCGA-DX-A3LS	12	89968275	90198467	7	0
TCGA-DX-A3LS	12	90199042	90249747	12	0
TCGA-DX-A3LS	12	90249822	90422591	3	1
TCGA-DX-A3LS	12	90426022	90772592	20	1
TCGA-DX-A3LS	12	90772739	91257267	8	1
TCGA-DX-A3LS	12	91264253	94824079	1	0
TCGA-DX-A3LS	12	94824368	94856219	6	1
TCGA-DX-A3LS	12	94858312	94866666	5	1
TCGA-DX-A3LS	12	94867792	95138590	1	1
TCGA-DX-A3LS	12	95140649	96008407	4	1
TCGA-DX-A3LS	12	96009421	96370017	19	2
TCGA-DX-A3LS	12	96374314	99039443	1	0
TCGA-DX-A3LS	12	99039512	99093441	11	2
TCGA-DX-A3LS	12	99093724	101515473	1	0
TCGA-DX-A3LS	12	101517577	102241743	32	5
TCGA-DX-A3LS	12	102260133	105177112	1	0
TCGA-DX-A3LS	12	105178286	105803817	21	0
TCGA-DX-A3LS	12	105804152	106074975	8	1
TCGA-DX-A3LS	12	106077893	106677783	2	1
TCGA-DX-A3LS	12	106677859	106756925	6	1
TCGA-DX-A3LS	12	106757822	109055202	1	0
TCGA-DX-A3LS	12	109056091	109232663	5	1
TCGA-DX-A3LS	12	109235204	119047553	1	0
TCGA-DX-A3LS	12	119050237	119194542	19	1
TCGA-DX-A3LS	12	119194908	121299285	1	0
TCGA-DX-A3LS	12	121299779	122056939	18	1
TCGA-DX-A3LS	12	122058831	122404047	6	0
TCGA-DX-A3LS	12	122414808	123124749	1	0
TCGA-DX-A3LS	12	123126701	123960528	23	1
TCGA-DX-A3LS	12	123963294	124974722	1	0
TCGA-DX-A3LS	12	124975271	125545209	6	1
TCGA-DX-A3LS	12	125545593	133201603	1	0
TCGA-DX-A3LS	13	18452809	114342922	1	0
TCGA-DX-A3LS	14	18225647	106877229	1	1
TCGA-DX-A3LS	15	19811075	101928837	1	0
TCGA-DX-A3LS	16	10777	90221127	1	1
TCGA-DX-A3LS	17	150733	83090856	1	1
TCGA-DX-A3LS	18	48133	80257174	1	1
TCGA-DX-A3LS	19	90910	38363459	1	1
TCGA-DX-A3LS	19	38366368	38748537	6	3
TCGA-DX-A3LS	19	38753441	58586487	1	1
TCGA-DX-A3LS	20	80664	30206919	1	0
TCGA-DX-A3LS	20	30208745	30299006	3	1
TCGA-DX-A3LS	20	30299021	30417073	2	1
TCGA-DX-A3LS	20	31247246	31783089	6	1
TCGA-DX-A3LS	20	31785439	32107342	3	1
TCGA-DX-A3LS	20	32116126	34755354	1	1
TCGA-DX-A3LS	20	34771525	39099909	5	1
TCGA-DX-A3LS	20	39100379	41923235	7	1
TCGA-DX-A3LS	20	41925149	42910343	2	1
TCGA-DX-A3LS	20	42912144	43624866	5	1
TCGA-DX-A3LS	20	43630022	44224409	8	1
TCGA-DX-A3LS	20	44226452	47360986	1	0
TCGA-DX-A3LS	20	47361575	48849144	1	1
TCGA-DX-A3LS	20	48852277	52295405	1	0
TCGA-DX-A3LS	20	52300383	52553310	2	1
TCGA-DX-A3LS	20	52558604	52795856	7	1
TCGA-DX-A3LS	20	52795991	55503037	1	0
TCGA-DX-A3LS	20	55503388	55602423	3	2
TCGA-DX-A3LS	20	55606804	56439868	1	0
TCGA-DX-A3LS	20	56440110	59297830	3	1
TCGA-DX-A3LS	20	59303025	64324800	1	0
TCGA-DX-A3LS	21	10336543	46677045	1	1
TCGA-DX-A3LS	22	15294545	23619452	1	0
TCGA-DX-A3LS	22	23628243	23703048	8	2
TCGA-DX-A3LS	22	23704451	32762107	1	0
TCGA-DX-A3LS	22	32763650	34087227	1	1
TCGA-DX-A3LS	22	34088141	37652027	1	0
TCGA-DX-A3LS	22	37659826	46349736	1	1
TCGA-DX-A3LS	22	46352413	50796027	1	0
TCGA-DX-A3LS	X	251810	23758540	1	1
TCGA-DX-A3LS	X	23762509	24760969	2	1
TCGA-DX-A3LS	X	24761430	84561602	1	1
TCGA-DX-A3LS	X	84562097	85275311	3	1
TCGA-DX-A3LS	X	85276740	101005537	1	1
TCGA-DX-A3LS	X	101006312	101587261	3	1
TCGA-DX-A3LS	X	101587934	156004181	1	1
