sample	chr	startpos	endpos	nMajor	nMinor
TCGA-MA-AA41	1	61735	121741181	1	1
TCGA-MA-AA41	1	143285278	248930189	2	1
TCGA-MA-AA41	2	12784	84555626	2	1
TCGA-MA-AA41	2	84558055	88810233	2	0
TCGA-MA-AA41	2	88810258	140738715	1	1
TCGA-MA-AA41	2	140741811	140832101	0	0
TCGA-MA-AA41	2	140832671	242147305	1	1
TCGA-MA-AA41	3	18667	426851	1	0
TCGA-MA-AA41	3	429125	749645	4	1
TCGA-MA-AA41	3	749888	888884	1	0
TCGA-MA-AA41	3	896571	49694700	1	1
TCGA-MA-AA41	3	49697440	60472286	1	0
TCGA-MA-AA41	3	60472875	60478542	0	0
TCGA-MA-AA41	3	60479546	90453712	1	0
TCGA-MA-AA41	3	93800634	114297948	2	2
TCGA-MA-AA41	3	114298335	114518186	4	2
TCGA-MA-AA41	3	114518518	198169247	2	2
TCGA-MA-AA41	4	12281	12011976	1	0
TCGA-MA-AA41	4	12012227	12844576	5	1
TCGA-MA-AA41	4	12845451	17628569	2	1
TCGA-MA-AA41	4	17640962	49577150	1	1
TCGA-MA-AA41	4	49582092	65396331	2	1
TCGA-MA-AA41	4	65397935	65511915	8	1
TCGA-MA-AA41	4	65512474	66381402	5	1
TCGA-MA-AA41	4	66383264	76070744	3	1
TCGA-MA-AA41	4	76070744	81909229	1	1
TCGA-MA-AA41	4	81909803	86545520	2	1
TCGA-MA-AA41	4	86550490	86789190	1	0
TCGA-MA-AA41	4	86796098	190106768	2	1
TCGA-MA-AA41	5	15532	50277291	2	1
TCGA-MA-AA41	5	50277308	181363319	1	1
TCGA-MA-AA41	6	149661	253272	2	0
TCGA-MA-AA41	6	253861	18292792	1	0
TCGA-MA-AA41	6	18293160	22868878	2	1
TCGA-MA-AA41	6	22868920	55232719	2	0
TCGA-MA-AA41	6	55251308	56594456	3	0
TCGA-MA-AA41	6	56594678	60352984	3	1
TCGA-MA-AA41	6	60354473	170741917	1	1
TCGA-MA-AA41	7	43259	37908905	2	1
TCGA-MA-AA41	7	37909112	52498476	2	0
TCGA-MA-AA41	7	52501083	52675050	7	2
TCGA-MA-AA41	7	52682077	52812877	31	1
TCGA-MA-AA41	7	52821902	54600051	22	2
TCGA-MA-AA41	7	54600144	55431898	32	2
TCGA-MA-AA41	7	55432952	57799835	2	0
TCGA-MA-AA41	7	57801976	159334314	2	1
TCGA-MA-AA41	8	81254	26419561	1	0
TCGA-MA-AA41	8	26427771	38441129	2	1
TCGA-MA-AA41	8	38441901	43912083	1	0
TCGA-MA-AA41	8	43923771	145072769	2	1
TCGA-MA-AA41	9	46587	11369154	1	0
TCGA-MA-AA41	9	11370109	15642419	2	1
TCGA-MA-AA41	9	15650506	16473034	5	1
TCGA-MA-AA41	9	16475727	130174499	1	1
TCGA-MA-AA41	9	130174525	131657025	3	1
TCGA-MA-AA41	9	131658008	131673775	5	2
TCGA-MA-AA41	9	131676550	132142316	12	1
TCGA-MA-AA41	9	132145462	134206607	2	1
TCGA-MA-AA41	9	134209258	138200944	1	0
TCGA-MA-AA41	10	26823	69670001	1	1
TCGA-MA-AA41	10	69671912	133769379	3	1
TCGA-MA-AA41	11	198572	135074876	1	1
TCGA-MA-AA41	12	51460	133201603	1	1
TCGA-MA-AA41	13	18452809	114342922	1	1
TCGA-MA-AA41	14	18225647	106877229	1	1
TCGA-MA-AA41	15	19811075	27606127	2	0
TCGA-MA-AA41	15	27620590	28116646	2	1
TCGA-MA-AA41	15	28118644	101928837	2	0
TCGA-MA-AA41	16	10777	6001447	2	1
TCGA-MA-AA41	16	6002303	73537889	1	1
TCGA-MA-AA41	16	73539320	73899017	1	0
TCGA-MA-AA41	16	73903506	90221127	1	1
TCGA-MA-AA41	17	150733	53990523	1	1
TCGA-MA-AA41	17	53992698	56596180	3	1
TCGA-MA-AA41	17	56602339	62606312	2	1
TCGA-MA-AA41	17	62607564	75042037	4	2
TCGA-MA-AA41	17	75042250	75501358	7	2
TCGA-MA-AA41	17	75511785	77551814	6	0
TCGA-MA-AA41	17	77553656	77883719	8	0
TCGA-MA-AA41	17	77888532	83090856	1	0
TCGA-MA-AA41	18	48133	67317073	1	0
TCGA-MA-AA41	18	67317090	73743205	1	1
TCGA-MA-AA41	18	73743250	80257174	1	0
TCGA-MA-AA41	19	90910	58586487	1	1
TCGA-MA-AA41	20	80664	62698759	1	1
TCGA-MA-AA41	20	62700093	64324800	2	1
TCGA-MA-AA41	21	10336543	46677045	1	1
TCGA-MA-AA41	22	15294545	50796027	1	1
TCGA-MA-AA41	X	251810	2869414	1	1
TCGA-MA-AA41	X	2871807	9106211	1	0
TCGA-MA-AA41	X	9109196	9449984	4	1
TCGA-MA-AA41	X	9450155	58535497	2	1
TCGA-MA-AA41	X	62509359	67766885	1	0
TCGA-MA-AA41	X	67767616	68899659	1	1
TCGA-MA-AA41	X	68905719	156004181	1	0
